Statistical Mechanics of Biopolymers.- Random Walk Models for the
Conformation.- Flory-Huggins Theory for Biopolymer Solutions.- Protein
Electrostatics and Solvation.- Implicit Continuum Solvent Models.-
Debye-Hückel Theory.- Protonation Equilibria.- Reaction Kinetics.-
Formal Kinetics.- Kinetic Theory: Fokker-Planck Equation.- Kramers'
Theory.- Dispersive Kinetics.- Transport Processes.- Nonequilibrium
Thermodynamics.- Simple Transport Processes.- Ion Transport Through a
Membrane.- Reaction-Diffusion Systems.- Reaction Rate Theory.-
Equilibrium Reactions.- Calculation of Reaction Rates.- Marcus Theory of
Electron Transfer.- Elementry Photophysis.- Molecular States.- Optical
Transitions.- The Displaced Harmonic Oscillator Model.- Spectral
Diffusion.- Crossing of Two Electronic States.- Dynamics of an Excited
State.- Elementry Photoinduced Processes.- Photophysics of Chlorophylls
and Carotenoids.- Incoherent Energy Transfer.- Coherent Excitations in
Photosynthetic Systems.- Ultrafast Electron Transfer Processes in the
Photosynthetic Reaction Center.- Proton Transfer in Biomolecules.-
Molecular Motor Models.- Continuous Ratchet Models.- Discrete Ratchet
Models.- The Grand Canonical Ensemble.- Time Correlation Function of the
Displaced Harmonic Oscillator Model.- The Saddle Point Method.